object_3d.hpp
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- /*
- * ===========================================================================
- * PRODUCTION $Log: object_3d.hpp,v $
- * PRODUCTION Revision 1000.1 2004/04/12 17:32:50 gouriano
- * PRODUCTION PRODUCTION: UPGRADED [CATCHUP_003] Dev-tree R1.6
- * PRODUCTION
- * ===========================================================================
- */
- /* $Id: object_3d.hpp,v 1000.1 2004/04/12 17:32:50 gouriano Exp $
- * ===========================================================================
- *
- * PUBLIC DOMAIN NOTICE
- * National Center for Biotechnology Information
- *
- * This software/database is a "United States Government Work" under the
- * terms of the United States Copyright Act. It was written as part of
- * the author's official duties as a United States Government employee and
- * thus cannot be copyrighted. This software/database is freely available
- * to the public for use. The National Library of Medicine and the U.S.
- * Government have not placed any restriction on its use or reproduction.
- *
- * Although all reasonable efforts have been taken to ensure the accuracy
- * and reliability of the software and data, the NLM and the U.S.
- * Government do not and cannot warrant the performance or results that
- * may be obtained by using this software or data. The NLM and the U.S.
- * Government disclaim all warranties, express or implied, including
- * warranties of performance, merchantability or fitness for any particular
- * purpose.
- *
- * Please cite the author in any work or product based on this material.
- *
- * ===========================================================================
- *
- * Authors: Paul Thiessen
- *
- * File Description:
- * holds 3d-objects - helix cylinders and strand bricks
- *
- * ===========================================================================
- */
- #ifndef CN3D_OBJECT_3D__HPP
- #define CN3D_OBJECT_3D__HPP
- #include <objects/mmdb3/Residue_pntrs.hpp>
- #include <objects/mmdb3/Cylinder.hpp>
- #include <objects/mmdb3/Brick.hpp>
- #include "structure_base.hpp"
- #include "vector_math.hpp"
- BEGIN_SCOPE(Cn3D)
- class Object3D : public StructureBase
- {
- public:
- static const int VALUE_NOT_SET;
- int moleculeID, fromResidueID, toResidueID;
- protected:
- Object3D(StructureBase *parent,
- const ncbi::objects::CResidue_pntrs& residues);
- };
- class Helix3D : public Object3D
- {
- public:
- Helix3D(StructureBase *parent,
- const ncbi::objects::CCylinder& cylinder, const ncbi::objects::CResidue_pntrs& residues);
- Vector Nterm, Cterm;
- bool Draw(const AtomSet *data) const;
- };
- class Strand3D : public Object3D
- {
- public:
- Strand3D(StructureBase *parent,
- const ncbi::objects::CBrick& brick, const ncbi::objects::CResidue_pntrs& residues);
- Vector Nterm, Cterm, unitNormal;
- bool Draw(const AtomSet *data) const;
- };
- END_SCOPE(Cn3D)
- #endif // CN3D_OBJECT_3D__HPP
- /*
- * ---------------------------------------------------------------------------
- * $Log: object_3d.hpp,v $
- * Revision 1000.1 2004/04/12 17:32:50 gouriano
- * PRODUCTION: UPGRADED [CATCHUP_003] Dev-tree R1.6
- *
- * Revision 1.6 2004/02/19 17:05:00 thiessen
- * remove cn3d/ from include paths; add pragma to disable annoying msvc warning
- *
- * Revision 1.5 2003/02/03 19:20:04 thiessen
- * format changes: move CVS Log to bottom of file, remove std:: from .cpp files, and use new diagnostic macros
- *
- * Revision 1.4 2001/02/08 23:01:14 thiessen
- * hook up C-toolkit stuff for threading; working PSSM calculation
- *
- * Revision 1.3 2000/08/16 14:18:20 thiessen
- * map 3-d objects to molecules
- *
- * Revision 1.2 2000/08/13 02:42:13 thiessen
- * added helix and strand objects
- *
- * Revision 1.1 2000/08/11 18:24:41 thiessen
- * add 3-d objects code
- *
- */