English
- /*
- * ===========================================================================
- * PRODUCTION $Log: shi_reader.hpp,v $
- * PRODUCTION Revision 1000.1 2004/06/01 21:01:51 gouriano
- * PRODUCTION PRODUCTION: UPGRADED [GCC34_MSVC7] Dev-tree R1.3
- * PRODUCTION
- * ===========================================================================
- */
- #ifndef GUI_CORE_DOC_BASIC___SHI_READER__HPP
- #define GUI_CORE_DOC_BASIC___SHI_READER__HPP
- /* $Id: shi_reader.hpp,v 1000.1 2004/06/01 21:01:51 gouriano Exp $
- * ===========================================================================
- *
- * PUBLIC DOMAIN NOTICE
- * National Center for Biotechnology Information
- *
- * This software/database is a "United States Government Work" under the
- * terms of the United States Copyright Act. It was written as part of
- * the author's official duties as a United States Government employee and
- * thus cannot be copyrighted. This software/database is freely available
- * to the public for use. The National Library of Medicine and the U.S.
- * Government have not placed any restriction on its use or reproduction.
- *
- * Although all reasonable efforts have been taken to ensure the accuracy
- * and reliability of the software and data, the NLM and the U.S.
- * Government do not and cannot warrant the performance or results that
- * may be obtained by using this software or data. The NLM and the U.S.
- * Government disclaim all warranties, express or implied, including
- * warranties of performance, merchantability or fitness for any particular
- * purpose.
- *
- * Please cite the author in any work or product based on this material.
- *
- * ===========================================================================
- *
- * Authors: Vladimir Tereshkov
- *
- * File Description:
- * CShiReader - taxplot file format loader
- */
- #include <corelib/ncbistd.hpp>
- #include <gui/core/doc_loader.hpp>
- #include <gui/plugin/MessageStatus.hpp>
- #include <gui/plugin/PluginInfo.hpp>
- #include <objmgr/scope.hpp>
- #include <objects/seq/Bioseq.hpp>
- #include <objects/seq/Seq_annot.hpp>
- #include <objects/seqfeat/Seq_feat.hpp>
- #include <objects/seqalign/Seq_align.hpp>
- #include <objects/seqset/Seq_entry.hpp>
- #include <objects/seqset/Bioseq_set.hpp>
- #include <objects/submit/Seq_submit.hpp>
- #include "ishi_cache.hpp"
- BEGIN_NCBI_SCOPE
- class IDocument;
- class CObjectInfo;
- class CShiReader : public CDocLoader<CShiReader>
- {
- public:
- CShiReader();
- ~CShiReader();
- static void GetInfo(objects::CPluginInfo& info);
- // virtual hook: load a document
- void Load(objects::CPluginMessage& msg);
- };
- struct SOneShiRecord {
- int m_Nqugi;
- int m_Dagi;
- int m_Taxid;
- int m_Score;
- int m_Orgclass;
- int m_Symmet;
- int m_Chromosome;
- int m_Pdb;
- int m_Gi;
- };
- END_NCBI_SCOPE
- /*
- * ===========================================================================
- * $Log: shi_reader.hpp,v $
- * Revision 1000.1 2004/06/01 21:01:51 gouriano
- * PRODUCTION: UPGRADED [GCC34_MSVC7] Dev-tree R1.3
- *
- * Revision 1.3 2004/05/20 21:39:06 tereshko
- * Change path to ishi_cache.hpp
- *
- * Revision 1.2 2004/01/28 16:00:56 tereshko
- * Added current gi extraction, loosen filter criteria
- *
- * Revision 1.1 2004/01/21 16:24:47 tereshko
- * CShiReader moved in
- *
- * Revision 1.2 2004/01/21 14:16:29 dicuccio
- * Adjusted API to be more coding standard compliant.
- *
- * Revision 1.1 2004/01/14 16:35:59 tereshko
- * CShiReader data plugin
- *
- * Revision 1.1 2003/12/09 00:20:09 jcherry
- * Initial version
- *
- * ===========================================================================
- */
- #endif // GUI_CORE_DOC_BASIC___SHI_READER__HPP
