utils.hpp
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- /*
- * ===========================================================================
- * PRODUCTION $Log: utils.hpp,v $
- * PRODUCTION Revision 1000.1 2004/04/12 19:31:27 gouriano
- * PRODUCTION PRODUCTION: UPGRADED [CATCHUP_003] Dev-tree R1.3
- * PRODUCTION
- * ===========================================================================
- */
- #ifndef GUI_PLUGINS_ALGO___UTILS__HPP
- #define GUI_PLUGINS_ALGO___UTILS__HPP
- /* $Id: utils.hpp,v 1000.1 2004/04/12 19:31:27 gouriano Exp $
- * ===========================================================================
- *
- * PUBLIC DOMAIN NOTICE
- * National Center for Biotechnology Information
- *
- * This software/database is a "United States Government Work" under the
- * terms of the United States Copyright Act. It was written as part of
- * the author's official duties as a United States Government employee and
- * thus cannot be copyrighted. This software/database is freely available
- * to the public for use. The National Library of Medicine and the U.S.
- * Government have not placed any restriction on its use or reproduction.
- *
- * Although all reasonable efforts have been taken to ensure the accuracy
- * and reliability of the software and data, the NLM and the U.S.
- * Government do not and cannot warrant the performance or results that
- * may be obtained by using this software or data. The NLM and the U.S.
- * Government disclaim all warranties, express or implied, including
- * warranties of performance, merchantability or fitness for any particular
- * purpose.
- *
- * Please cite the author in any work or product based on this material.
- *
- * ===========================================================================
- *
- * Authors: Mike DiCuccio
- *
- * File Description:
- *
- */
- #include <objects/seqfeat/Org_ref.hpp>
- #include <objmgr/bioseq_handle.hpp>
- BEGIN_NCBI_SCOPE
- /// Return the org-ref associated with a given bioseq handle.
- /// This makes use of the object manager's iterators to insure proper
- /// retrieval and filtering of the appropriate descriptors, and
- /// returns the org-ref if it is found. The return value should
- /// be tested for validity, as an empty CConstRef<> will be returned
- /// if no org-ref is found.
- CConstRef<objects::COrg_ref> GetOrganism(const objects::CBioseq_Handle& handle);
- END_NCBI_SCOPE
- /*
- * ===========================================================================
- * $Log: utils.hpp,v $
- * Revision 1000.1 2004/04/12 19:31:27 gouriano
- * PRODUCTION: UPGRADED [CATCHUP_003] Dev-tree R1.3
- *
- * Revision 1.3 2004/02/27 17:01:19 dicuccio
- * Un-inlined GetOrganism()
- *
- * Revision 1.2 2004/02/09 19:18:51 grichenk
- * Renamed CDesc_CI to CSeq_descr_CI. Redesigned CSeq_descr_CI
- * and CSeqdesc_CI to avoid using data directly.
- *
- * Revision 1.1 2003/09/25 17:49:17 dicuccio
- * Cleaned up handling of org-refs - implemented private function to return the
- * apporpriate COrg_ref. Added virtual destructors where necessary
- *
- * ===========================================================================
- */
- #endif // GUI_PLUGINS_ALGO___UTILS__HPP