panel.hpp
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- /*
- * ===========================================================================
- * PRODUCTION $Log: panel.hpp,v $
- * PRODUCTION Revision 1000.2 2004/06/01 21:07:58 gouriano
- * PRODUCTION PRODUCTION: UPGRADED [GCC34_MSVC7] Dev-tree R1.10
- * PRODUCTION
- * ===========================================================================
- */
- #ifndef GUI_WIDGETS_ALN_TEXTALN___PANEL__HPP
- #define GUI_WIDGETS_ALN_TEXTALN___PANEL__HPP
- /* $Id: panel.hpp,v 1000.2 2004/06/01 21:07:58 gouriano Exp $
- * ===========================================================================
- *
- * PUBLIC DOMAIN NOTICE
- * National Center for Biotechnology Information
- *
- * This software/database is a "United States Government Work" under the
- * terms of the United States Copyright Act. It was written as part of
- * the author's official duties as a United States Government employee and
- * thus cannot be copyrighted. This software/database is freely available
- * to the public for use. The National Library of Medicine and the U.S.
- * Government have not placed any restriction on its use or reproduction.
- *
- * Although all reasonable efforts have been taken to ensure the accuracy
- * and reliability of the software and data, the NLM and the U.S.
- * Government do not and cannot warrant the performance or results that
- * may be obtained by using this software or data. The NLM and the U.S.
- * Government disclaim all warranties, express or implied, including
- * warranties of performance, merchantability or fitness for any particular
- * purpose.
- *
- * Please cite the author in any work or product based on this material.
- *
- * ===========================================================================
- *
- * Authors: Vlad Lebedev
- *
- * File Description:
- * Panel for the text alignment view widget
- * (see <gui/widgets/aln_textaln/textaln_view.hpp>)
- *
- */
- #include <gui/gui.hpp>
- #include <gui/opengl.h>
- #include <gui/opengl/glbitmapfont.hpp>
- #include <gui/widgets/aln_data/align_ds.hpp>
- #include <gui/widgets/aln_textaln/view.hpp>
- #include <gui/objutils/feature.hpp>
- #include <objects/seqloc/Na_strand.hpp>
- #include <objects/seqalign/Dense_seg.hpp>
- #include <objmgr/feat_ci.hpp>
- #include <FL/Fl.H>
- #include <FL/Fl_Gl_Window.H>
- #include <FL/Fl_Slider.H>
- BEGIN_NCBI_SCOPE
- class CTextAlnPanel : public Fl_Gl_Window
- {
- public:
- typedef unsigned int TDim;
- typedef objects::CDense_seg::TNumseg TNumseg;
- typedef TDim TNumrow;
- CTextAlnPanel(int x, int y, int w, int h, const char* label = NULL);
- virtual ~CTextAlnPanel();
- void SetDataSource(CAlignDataSource* ds);
- // features
- void SetFeatureDisplay(CTextAlnView::EFeatureDisplay disp);
- // Colors
- void SetColor(CTextAlnView::EDisplayElement elem, Fl_Color color);
- Fl_Color GetColor(CTextAlnView::EDisplayElement elem) const;
- void SelectAll(bool flag);
- void ShowSequenceAsDots (bool show_dots);
- void SetAnchor(size_t idx);
- void UnsetAnchor(void);
- void Scroll(TSeqPos xPos, TSeqPos yPos);
-
- class CParaG {
- public:
- enum EParaGLineType {
- eSequence,
- eFeature,
- eInsertion
- };
- typedef int TParaGLineType; // EParaGLineType
-
- CParaG(TParaGLineType type, size_t idx, CLayoutFeat* feature = NULL) :
- m_type(type), m_idx(idx), m_feature(feature) {};
- TParaGLineType GetType(void) const { return m_type; }
- size_t GetIndex(void) const { return m_idx; }
- const CLayoutFeat* Feature(void) const { return m_feature; }
- private:
- TParaGLineType m_type;
- size_t m_idx; // index in the CDens_seg
- CRef<CLayoutFeat> m_feature;
- };
- private:
- CRef<CAlignDataSource> m_DS;
- enum ESelectionType {
- eRow,
- eCol
- };
- // Scrollbars values
- TSeqPos m_ScrX;
- TNumrow m_ScrY;
- TSeqPos m_AlnWidth;
- TNumrow m_AlnHeight;
-
- Fl_Color m_SelectionColor; // Color for selection
- Fl_Color m_BackgroundColor; // Color for background
- Fl_Color m_NumbersColor; // Color for grid numbers
- Fl_Color m_GridColor; // Color for this grid
- Fl_Color m_SequenceColor; // Color for sequence letters
- Fl_Color m_MismatchColor; // Color for mismatch letters
- CTextAlnView::TFeatureDisplay m_featDisp;
- int m_Width; // Window size in pixels
- int m_Height;
-
- TNumrow m_Anchor; // anchored sequence index
- // our font
- CGlBitmapFont m_Font_8x13;
- // Define viewport coordinates
- GLuint m_NP[4]; // Numbers panel
- GLuint m_BP[4]; // Text panel
- GLuint m_LP[4]; // Labels panel
- GLuint m_IP[4]; // Info panel
- //GLuint m_FontOffset; // Display list for sequence font
-
- bool m_ShowSeqAsDots; // Show letters for mismatches, dots otherwise
- vector<CParaG> m_ParaG; // info about alignment lines
- vector<bool> m_RowSelect; // info about selected lines (horisontal)
- vector<bool> m_ColSelect; // info about selected lines (vertical)
-
- // --- Virtual (FLTK)
- virtual void draw();
- virtual int handle(int event);
- // --- Methods
- void x_PrepareData (void);
- void x_SetViewPorts (void);
- void x_AdjustScrollBars (void);
-
- void x_DrawSeqNumPanel (void);
- void x_DrawTextPanel (void);
- void x_DrawLabelPanel (void);
- void x_DrawInfoPanel (void);
- void x_DrawGrid (void);
- void x_DrawSelection (int size, ESelectionType type) const;
- void x_DrawSequence (TNumrow row, size_t idx) const;
- void x_DrawFeatures (TNumrow row, size_t idx) const;
- void x_DrawInsertions(TNumrow row, size_t idx) const;
- void x_DrawLine(GLfloat x1, GLfloat y1, GLfloat x2,
- GLfloat y2, GLfloat width = 1.0f) const;
- void x_DrawAnchorMark(TNumrow y) const;
- void x_AddFeaturesAtIndex(size_t idx);
- void x_AddInsertsAtIndex (size_t idx);
- void x_ActivateViewPort (GLuint* port) const;
- string x_PreprocessSeq(const string& s) const;
- size_t x_GetAtXY(int x, int y) const;
-
- TSeqPos x_GetAlnWidth (void) const;
- TNumrow x_GetAlnHeigth(void) const;
- TSignedSeqPos x_GetStartAt(size_t i, int seg) const;
- };
- END_NCBI_SCOPE
- /*
- * ===========================================================================
- * $Log: panel.hpp,v $
- * Revision 1000.2 2004/06/01 21:07:58 gouriano
- * PRODUCTION: UPGRADED [GCC34_MSVC7] Dev-tree R1.10
- *
- * Revision 1.10 2004/05/03 13:23:57 dicuccio
- * gui/utils --> gui/objutils where needed
- *
- * Revision 1.9 2004/03/11 17:50:41 dicuccio
- * Updated typedefs: dropped TDimension, TPosition, TIndex, TColor; use TSeqRange
- * instead of TRange
- *
- * Revision 1.8 2003/09/29 15:49:58 dicuccio
- * Use CGlBitmapFont instead of home-grown font.
- *
- * Revision 1.7 2003/09/24 18:34:58 dicuccio
- * Use new generic alignment data source. Removed USING_SCOPE(objects) from
- * headers; used objects:: where necessary
- *
- * Revision 1.6 2003/08/18 15:23:40 lebedev
- * Changed nales: CFeature -> CLayoutFeat
- *
- * Revision 1.5 2003/06/02 16:06:27 dicuccio
- * Rearranged src/objects/ subtree. This includes the following shifts:
- * - src/objects/asn2asn --> arc/app/asn2asn
- * - src/objects/testmedline --> src/objects/ncbimime/test
- * - src/objects/objmgr --> src/objmgr
- * - src/objects/util --> src/objmgr/util
- * - src/objects/alnmgr --> src/objtools/alnmgr
- * - src/objects/flat --> src/objtools/flat
- * - src/objects/validator --> src/objtools/validator
- * - src/objects/cddalignview --> src/objtools/cddalignview
- * In addition, libseq now includes six of the objects/seq... libs, and libmmdb
- * replaces the three libmmdb? libs.
- *
- * Revision 1.4 2003/03/28 18:05:19 dicuccio
- * Ooops. Use 'gui/opengl.h' instead of 'gui/opengl.hpp'
- *
- * Revision 1.3 2003/03/28 13:39:45 dicuccio
- * Use gui/opengl.h instead of OpenGL headers directly
- *
- * Revision 1.2 2003/03/27 20:38:57 dicuccio
- * Fixed compilation errors under Linux (gcc-3.0.4)
- *
- * Revision 1.1 2003/03/27 17:04:32 lebedev
- * Text Alignment Widget: Initial revision
- *
- * ===========================================================================
- */
- #endif /* GUI_WIDGETS_ALN_TEXTALN___PANEL__HPP */