Seqdesc.cpp
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- /*
- * ===========================================================================
- * PRODUCTION $Log: Seqdesc.cpp,v $
- * PRODUCTION Revision 1000.1 2004/06/01 19:33:22 gouriano
- * PRODUCTION PRODUCTION: UPGRADED [GCC34_MSVC7] Dev-tree R6.4
- * PRODUCTION
- * ===========================================================================
- */
- /* $Id: Seqdesc.cpp,v 1000.1 2004/06/01 19:33:22 gouriano Exp $
- * ===========================================================================
- *
- * PUBLIC DOMAIN NOTICE
- * National Center for Biotechnology Information
- *
- * This software/database is a "United States Government Work" under the
- * terms of the United States Copyright Act. It was written as part of
- * the author's official duties as a United States Government employee and
- * thus cannot be copyrighted. This software/database is freely available
- * to the public for use. The National Library of Medicine and the U.S.
- * Government have not placed any restriction on its use or reproduction.
- *
- * Although all reasonable efforts have been taken to ensure the accuracy
- * and reliability of the software and data, the NLM and the U.S.
- * Government do not and cannot warrant the performance or results that
- * may be obtained by using this software or data. The NLM and the U.S.
- * Government disclaim all warranties, express or implied, including
- * warranties of performance, merchantability or fitness for any particular
- * purpose.
- *
- * Please cite the author in any work or product based on this material.
- *
- * ===========================================================================
- *
- * Author: .......
- *
- * File Description:
- * .......
- *
- * Remark:
- * This code was originally generated by application DATATOOL
- * using specifications from the ASN data definition file
- * 'seq.asn'.
- */
- // standard includes
- #include <ncbi_pch.hpp>
- #include <serial/enumvalues.hpp>
- // generated includes
- #include <objects/general/Date.hpp>
- #include <objects/general/Dbtag.hpp>
- #include <objects/general/User_object.hpp>
- #include <objects/pub/Pub_equiv.hpp>
- #include <objects/seq/Seqdesc.hpp>
- #include <objects/seq/MolInfo.hpp>
- #include <objects/seqfeat/Org_ref.hpp>
- #include <objects/seqfeat/BioSource.hpp>
- // generated classes
- BEGIN_NCBI_SCOPE
- BEGIN_objects_SCOPE // namespace ncbi::objects::
- // destructor
- CSeqdesc::~CSeqdesc(void)
- {
- }
- static void s_GetContentLabel(const CSeqdesc& desc, string* const label)
- {
- const CEnumeratedTypeValues* tv;
- switch (desc.Which()) {
- case CSeqdesc::e_Comment:
- (*label) += desc.GetComment();
- return;
- case CSeqdesc::e_Region:
- (*label) += desc.GetRegion();
- return;
- case CSeqdesc::e_Het:
- (*label) += desc.GetHet();
- return;
- case CSeqdesc::e_Title:
- (*label) += desc.GetTitle();
- return;
- case CSeqdesc::e_Name:
- (*label) += desc.GetName();
- return;
- case CSeqdesc::e_Create_date:
- desc.GetCreate_date().GetDate(label);
- return;
- case CSeqdesc::e_Update_date:
- desc.GetUpdate_date().GetDate(label);
- return;
- case CSeqdesc::e_Org:
- desc.GetOrg().GetLabel(label);
- return;
- case CSeqdesc::e_Pub:
- desc.GetPub().GetPub().GetLabel(label);
- return;
- case CSeqdesc::e_User:
- desc.GetUser().GetLabel(label);
- return;
- case CSeqdesc::e_Method:
- tv = GetTypeInfo_enum_EGIBB_method();
- (*label) += tv->FindName(desc.GetMethod(), true);
- return;
- case CSeqdesc::e_Mol_type:
- tv = GetTypeInfo_enum_EGIBB_mol();
- (*label) += tv->FindName(desc.GetMol_type(), true);
- return;
- case CSeqdesc::e_Modif:
- ITERATE(list<EGIBB_mod>, it, desc.GetModif()) {
- tv = GetTypeInfo_enum_EGIBB_mod();
- if (!label->empty()) {
- (*label) += string(",") + tv->FindName(*it, true);
- } else {
- (*label) += tv->FindName(*it, true);
- }
- }
- return;
- case CSeqdesc::e_Source:
- desc.GetSource().GetOrg().GetLabel(label);
- return;
- case CSeqdesc::e_Maploc:
- desc.GetMaploc().GetLabel(label);
- return;
- case CSeqdesc::e_Molinfo:
- desc.GetMolinfo().GetLabel(label);
- return;
- case CSeqdesc::e_Dbxref:
- desc.GetDbxref().GetLabel(label);
- return;
- default:
- return;
- }
- }
- void CSeqdesc::GetLabel(string* const label, ELabelType label_type) const
- {
- // Return if label is null
- if (!label) {
- return;
- }
- // Get type name for choice of this CSeqdesc object
- string name = SelectionName(Which());
- // Append label based on label_type
- switch (label_type) {
- case eBoth:
- (*label) += name + ": ";
- case eContent:
- s_GetContentLabel(*this, label);
- return;
- case eType:
- (*label) += name;
- return;
- }
- }
- END_objects_SCOPE // namespace ncbi::objects::
- END_NCBI_SCOPE
- /*
- * ===========================================================================
- *
- * $Log: Seqdesc.cpp,v $
- * Revision 1000.1 2004/06/01 19:33:22 gouriano
- * PRODUCTION: UPGRADED [GCC34_MSVC7] Dev-tree R6.4
- *
- * Revision 6.4 2004/05/19 17:25:14 gorelenk
- * Added include of PCH - ncbi_pch.hpp
- *
- * Revision 6.3 2003/03/11 15:53:25 kuznets
- * iterate -> ITERATE
- *
- * Revision 6.2 2002/10/03 19:09:42 clausen
- * Removed extra whitespace
- *
- * Revision 6.1 2002/10/03 16:50:56 clausen
- * Added GetLabel()
- *
- *
- * ===========================================================================
- */
- /* Original file checksum: lines: 64, chars: 1873, CRC32: d5933a71 */