English
- /*
- * ===========================================================================
- * PRODUCTION $Log: BioSource.cpp,v $
- * PRODUCTION Revision 1000.1 2004/06/01 19:33:45 gouriano
- * PRODUCTION PRODUCTION: UPGRADED [GCC34_MSVC7] Dev-tree R6.3
- * PRODUCTION
- * ===========================================================================
- */
- /* $Id: BioSource.cpp,v 1000.1 2004/06/01 19:33:45 gouriano Exp $
- * ===========================================================================
- *
- * PUBLIC DOMAIN NOTICE
- * National Center for Biotechnology Information
- *
- * This software/database is a "United States Government Work" under the
- * terms of the United States Copyright Act. It was written as part of
- * the author's official duties as a United States Government employee and
- * thus cannot be copyrighted. This software/database is freely available
- * to the public for use. The National Library of Medicine and the U.S.
- * Government have not placed any restriction on its use or reproduction.
- *
- * Although all reasonable efforts have been taken to ensure the accuracy
- * and reliability of the software and data, the NLM and the U.S.
- * Government do not and cannot warrant the performance or results that
- * may be obtained by using this software or data. The NLM and the U.S.
- * Government disclaim all warranties, express or implied, including
- * warranties of performance, merchantability or fitness for any particular
- * purpose.
- *
- * Please cite the author in any work or product based on this material.
- *
- * ===========================================================================
- *
- * Author: .......
- *
- * File Description:
- * .......
- *
- * Remark:
- * This code was originally generated by application DATATOOL
- * using specifications from the data definition file
- * 'seqfeat.asn'.
- */
- // standard includes
- // generated includes
- #include <ncbi_pch.hpp>
- #include <objects/seqfeat/BioSource.hpp>
- #include <objects/seqfeat/Org_ref.hpp>
- #include <objects/seqfeat/OrgName.hpp>
- // generated classes
- BEGIN_NCBI_SCOPE
- BEGIN_objects_SCOPE // namespace ncbi::objects::
- // destructor
- CBioSource::~CBioSource(void)
- {
- }
- int CBioSource::GetGenCode(void) const
- {
- try {
- int genome = 0;
- if ( IsSetGenome() ) {
- genome = GetGenome();
- }
- const COrgName& orn = GetOrg().GetOrgname();
- switch ( genome ) {
- case eGenome_kinetoplast:
- case eGenome_mitochondrion:
- // bacteria and plant organelle code
- return orn.GetMgcode();
- case eGenome_chloroplast:
- case eGenome_chromoplast:
- case eGenome_plastid:
- case eGenome_cyanelle:
- case eGenome_apicoplast:
- case eGenome_leucoplast:
- case eGenome_proplastid:
- // bacteria and plant plastids are code 11.
- return 11;
- default:
- return orn.GetGcode();
- }
- } catch ( CCoreException exp ) {
- return 0;
- }
- }
- END_objects_SCOPE // namespace ncbi::objects::
- END_NCBI_SCOPE
- /*
- * ===========================================================================
- *
- * $Log: BioSource.cpp,v $
- * Revision 1000.1 2004/06/01 19:33:45 gouriano
- * PRODUCTION: UPGRADED [GCC34_MSVC7] Dev-tree R6.3
- *
- * Revision 6.3 2004/05/19 17:26:04 gorelenk
- * Added include of PCH - ncbi_pch.hpp
- *
- * Revision 6.2 2002/11/26 19:01:11 shomrat
- * Bug fix in GetGenCode
- *
- * Revision 6.1 2002/11/26 18:50:31 shomrat
- * Add GetGenCode
- *
- *
- * ===========================================================================
- */
- /* Original file checksum: lines: 64, chars: 1883, CRC32: e1194deb */
