medline.asn
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上传日期：2007-06-13
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- --
- -- ===========================================================================
- -- PRODUCTION $Log: medline.asn,v $
- -- PRODUCTION Revision 1000.0 2003/10/29 21:19:01 gouriano
- -- PRODUCTION PRODUCTION: IMPORTED [ORIGINAL] Dev-tree R6.0
- -- PRODUCTION
- -- ===========================================================================
- --
- --$Revision: 1000.0 $
- --**********************************************************************
- --
- -- MEDLINE data definitions
- -- James Ostell, 1990
- --
- -- enhanced in 1996 to support PubMed records as well by simply adding
- -- the PubMedId and making MedlineId optional
- --
- --**********************************************************************
- NCBI-Medline DEFINITIONS ::=
- BEGIN
- EXPORTS Medline-entry, Medline-si;
- IMPORTS Cit-art, PubMedId FROM NCBI-Biblio
- Date FROM NCBI-General;
- -- a MEDLINE or PubMed entry
- Medline-entry ::= SEQUENCE {
- uid INTEGER OPTIONAL , -- MEDLINE UID, sometimes not yet available if from PubMed
- em Date , -- Entry Month
- cit Cit-art , -- article citation
- abstract VisibleString OPTIONAL ,
- mesh SET OF Medline-mesh OPTIONAL ,
- substance SET OF Medline-rn OPTIONAL ,
- xref SET OF Medline-si OPTIONAL ,
- idnum SET OF VisibleString OPTIONAL , -- ID Number (grants, contracts)
- gene SET OF VisibleString OPTIONAL ,
- pmid PubMedId OPTIONAL , -- MEDLINE records may include the PubMedId
- pub-type SET OF VisibleString OPTIONAL, -- may show publication types (review, etc)
- mlfield SET OF Medline-field OPTIONAL , -- additional Medline field types
- status INTEGER {
- publisher (1) , -- record as supplied by publisher
- premedline (2) , -- premedline record
- medline (3) } DEFAULT medline } -- regular medline record
- Medline-mesh ::= SEQUENCE {
- mp BOOLEAN DEFAULT FALSE , -- TRUE if main point (*)
- term VisibleString , -- the MeSH term
- qual SET OF Medline-qual OPTIONAL } -- qualifiers
- Medline-qual ::= SEQUENCE {
- mp BOOLEAN DEFAULT FALSE , -- TRUE if main point
- subh VisibleString } -- the subheading
- Medline-rn ::= SEQUENCE { -- medline substance records
- type ENUMERATED { -- type of record
- nameonly (0) ,
- cas (1) , -- CAS number
- ec (2) } , -- EC number
- cit VisibleString OPTIONAL , -- CAS or EC number if present
- name VisibleString } -- name (always present)
- Medline-si ::= SEQUENCE { -- medline cross reference records
- type ENUMERATED { -- type of xref
- ddbj (1) , -- DNA Data Bank of Japan
- carbbank (2) , -- Carbohydrate Structure Database
- embl (3) , -- EMBL Data Library
- hdb (4) , -- Hybridoma Data Bank
- genbank (5) , -- GenBank
- hgml (6) , -- Human Gene Map Library
- mim (7) , -- Mendelian Inheritance in Man
- msd (8) , -- Microbial Strains Database
- pdb (9) , -- Protein Data Bank (Brookhaven)
- pir (10) , -- Protein Identification Resource
- prfseqdb (11) , -- Protein Research Foundation (Japan)
- psd (12) , -- Protein Sequence Database (Japan)
- swissprot (13) , -- SwissProt
- gdb (14) } , -- Genome Data Base
- cit VisibleString OPTIONAL } -- the citation/accession number
- Medline-field ::= SEQUENCE {
- type INTEGER { -- Keyed type
- other (0) , -- look in line code
- comment (1) , -- comment line
- erratum (2) } , -- retracted, corrected, etc
- str VisibleString , -- the text
- ids SEQUENCE OF DocRef OPTIONAL } -- pointers relevant to this text
- DocRef ::= SEQUENCE { -- reference to a document
- type INTEGER {
- medline (1) ,
- pubmed (2) ,
- ncbigi (3) } ,
- uid INTEGER }
- END
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