seqalign.def
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上传日期:2007-06-13
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- ;
- ; ===========================================================================
- ; PRODUCTION $Log: seqalign.def,v $
- ; PRODUCTION Revision 1000.1 2004/04/12 17:26:31 gouriano
- ; PRODUCTION PRODUCTION: UPGRADED [CATCHUP_003] Dev-tree R6.7
- ; PRODUCTION
- ; ===========================================================================
- ;
- [-]
- _export = NCBI_SEQALIGN_EXPORT
- [Seq-align]
- score._type = vector
- [Dense-diag]
- starts.E._type = TSeqPos
- len._type = TSeqPos
- ; for consistency with Dense-seg.ids
- ids._type = vector
- starts._type = vector
- strands._type = vector
- scores._type = vector
- [Dense-seg]
- ; may contain occurrences of -1
- starts.E._type = TSignedSeqPos
- lens.E._type = TSeqPos
- ; to support binary searching
- ; to make binary searching on starts more useful
- ids._type = vector
- lens._type = vector
- starts._type = vector
- strands._type = vector
- scores._type = vector
- [Packed-seg]
- starts.E._type = TSeqPos
- lens.E._type = TSeqPos
- ids._type = vector
- lens._type = vector
- starts._type = vector
- strands._type = vector
- scores._type = vector
- present._type = vector
- [Std-seg]
- ids._type = vector
- loc._type = vector
- scores._type = vector