seq_align_handle.cpp
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- /*
- * ===========================================================================
- * PRODUCTION $Log: seq_align_handle.cpp,v $
- * PRODUCTION Revision 1000.0 2004/06/01 19:25:52 gouriano
- * PRODUCTION PRODUCTION: IMPORTED [GCC34_MSVC7] Dev-tree R1.2
- * PRODUCTION
- * ===========================================================================
- */
- /* $Id: seq_align_handle.cpp,v 1000.0 2004/06/01 19:25:52 gouriano Exp $
- * ===========================================================================
- *
- * PUBLIC DOMAIN NOTICE
- * National Center for Biotechnology Information
- *
- * This software/database is a "United States Government Work" under the
- * terms of the United States Copyright Act. It was written as part of
- * the author's official duties as a United States Government employee and
- * thus cannot be copyrighted. This software/database is freely available
- * to the public for use. The National Library of Medicine and the U.S.
- * Government have not placed any restriction on its use or reproduction.
- *
- * Although all reasonable efforts have been taken to ensure the accuracy
- * and reliability of the software and data, the NLM and the U.S.
- * Government do not and cannot warrant the performance or results that
- * may be obtained by using this software or data. The NLM and the U.S.
- * Government disclaim all warranties, express or implied, including
- * warranties of performance, merchantability or fitness for any particular
- * purpose.
- *
- * Please cite the author in any work or product based on this material.
- *
- * ===========================================================================
- *
- * Author: Aleksey Grichenko, Eugene Vasilchenko
- *
- * File Description:
- * Seq-align handle
- *
- */
- #include <ncbi_pch.hpp>
- #include <objmgr/seq_align_handle.hpp>
- #include <objmgr/scope.hpp>
- #include <objmgr/impl/seq_annot_info.hpp>
- BEGIN_NCBI_SCOPE
- BEGIN_SCOPE(objects)
- CSeq_align_Handle::CSeq_align_Handle(void)
- {
- return;
- }
- CSeq_align_Handle::CSeq_align_Handle(CScope& scope,
- const CSeq_annot_Info& annot_info,
- size_t index)
- : m_Scope(scope),
- m_Annot(&annot_info),
- m_Index(index)
- {
- return;
- }
- CSeq_align_Handle::~CSeq_align_Handle(void)
- {
- return;
- }
- const CSeq_align& CSeq_align_Handle::x_GetSeq_align(void) const
- {
- _ASSERT(m_Annot);
- return m_Annot->GetAnnotObject_Info(m_Index).GetAlign();
- }
- CConstRef<CSeq_align> CSeq_align_Handle::GetSeq_align(void) const
- {
- return ConstRef(&x_GetSeq_align());
- }
- CSeq_annot_Handle CSeq_align_Handle::GetAnnot(void) const
- {
- if ( m_Annot ) {
- return CSeq_annot_Handle(m_Scope.GetScope(), *m_Annot);
- }
- return CSeq_annot_Handle();
- }
- END_SCOPE(objects)
- END_NCBI_SCOPE
- /*
- * ===========================================================================
- * $Log: seq_align_handle.cpp,v $
- * Revision 1000.0 2004/06/01 19:25:52 gouriano
- * PRODUCTION: IMPORTED [GCC34_MSVC7] Dev-tree R1.2
- *
- * Revision 1.2 2004/05/21 21:42:12 gorelenk
- * Added PCH ncbi_pch.hpp
- *
- * Revision 1.1 2004/05/04 18:06:06 grichenk
- * Initial revision
- *
- *
- * ===========================================================================
- */