annot_object_index.cpp
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- /*
- * ===========================================================================
- * PRODUCTION $Log: annot_object_index.cpp,v $
- * PRODUCTION Revision 1000.2 2004/06/01 19:22:38 gouriano
- * PRODUCTION PRODUCTION: UPGRADED [GCC34_MSVC7] Dev-tree R1.3
- * PRODUCTION
- * ===========================================================================
- */
- /* $Id: annot_object_index.cpp,v 1000.2 2004/06/01 19:22:38 gouriano Exp $
- * ===========================================================================
- *
- * PUBLIC DOMAIN NOTICE
- * National Center for Biotechnology Information
- *
- * This software/database is a "United States Government Work" under the
- * terms of the United States Copyright Act. It was written as part of
- * the author's official duties as a United States Government employee and
- * thus cannot be copyrighted. This software/database is freely available
- * to the public for use. The National Library of Medicine and the U.S.
- * Government have not placed any restriction on its use or reproduction.
- *
- * Although all reasonable efforts have been taken to ensure the accuracy
- * and reliability of the software and data, the NLM and the U.S.
- * Government do not and cannot warrant the performance or results that
- * may be obtained by using this software or data. The NLM and the U.S.
- * Government disclaim all warranties, express or implied, including
- * warranties of performance, merchantability or fitness for any particular
- * purpose.
- *
- * Please cite the author in any work or product based on this material.
- *
- * ===========================================================================
- *
- * Author: Eugene Vasilchenko
- *
- * File Description:
- * AnnotObject indexes structures
- *
- */
- #include <ncbi_pch.hpp>
- #include <objmgr/impl/annot_object_index.hpp>
- #include <objmgr/impl/annot_object.hpp>
- BEGIN_NCBI_SCOPE
- BEGIN_SCOPE(objects)
- SAnnotObjects_Info::SAnnotObjects_Info(void)
- {
- }
- SAnnotObjects_Info::SAnnotObjects_Info(const CAnnotName& name)
- : m_Name(name)
- {
- }
- SAnnotObjects_Info::SAnnotObjects_Info(const SAnnotObjects_Info& info)
- : m_Name(info.m_Name)
- {
- _ASSERT(info.m_Keys.empty() && info.m_Infos.empty());
- }
- SAnnotObjects_Info::~SAnnotObjects_Info(void)
- {
- }
- void SAnnotObjects_Info::SetName(const CAnnotName& name)
- {
- m_Name = name;
- }
- void SAnnotObjects_Info::Reserve(size_t size, double keys_factor)
- {
- _ASSERT(m_Keys.empty() && m_Infos.empty());
- m_Keys.reserve(size_t(keys_factor*size));
- m_Infos.reserve(size);
- }
- void SAnnotObjects_Info::Clear(void)
- {
- m_Keys.clear();
- m_Infos.clear();
- }
- void SAnnotObjects_Info::AddKey(const SAnnotObject_Key& key)
- {
- m_Keys.push_back(key);
- }
- CAnnotObject_Info* SAnnotObjects_Info::AddInfo(const CAnnotObject_Info& info)
- {
- _ASSERT(m_Infos.capacity() > m_Infos.size());
- m_Infos.push_back(info);
- return &m_Infos.back();
- }
- END_SCOPE(objects)
- END_NCBI_SCOPE
- /*
- * ---------------------------------------------------------------------------
- * $Log: annot_object_index.cpp,v $
- * Revision 1000.2 2004/06/01 19:22:38 gouriano
- * PRODUCTION: UPGRADED [GCC34_MSVC7] Dev-tree R1.3
- *
- * Revision 1.3 2004/05/21 21:42:12 gorelenk
- * Added PCH ncbi_pch.hpp
- *
- * Revision 1.2 2003/11/26 17:55:56 vasilche
- * Implemented ID2 split in ID1 cache.
- * Fixed loading of splitted annotations.
- *
- * Revision 1.1 2003/10/07 13:43:23 vasilche
- * Added proper handling of named Seq-annots.
- * Added feature search from named Seq-annots.
- * Added configurable adaptive annotation search (default: gene, cds, mrna).
- * Fixed selection of blobs for loading from GenBank.
- * Added debug checks to CSeq_id_Mapper for easier finding lost CSeq_id_Handles.
- * Fixed leaked split chunks annotation stubs.
- * Moved some classes definitions in separate *.cpp files.
- *
- * ===========================================================================
- */