phylo_tree_node.hpp
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- /*
- * ===========================================================================
- * PRODUCTION $Log: phylo_tree_node.hpp,v $
- * PRODUCTION Revision 1000.1 2004/06/01 19:52:57 gouriano
- * PRODUCTION PRODUCTION: UPGRADED [GCC34_MSVC7] Dev-tree R1.4
- * PRODUCTION
- * ===========================================================================
- */
- #if !defined(AFX_PHYLO_TREE_NODE_HPP__2F61D68C_0454_4BD0_89F2_037863D53E27__INCLUDED_)
- #define AFX_PHYLO_TREE_NODE_HPP__2F61D68C_0454_4BD0_89F2_037863D53E27__INCLUDED_
- /* $Id: phylo_tree_node.hpp,v 1000.1 2004/06/01 19:52:57 gouriano Exp $
- * ===========================================================================
- *
- * PUBLIC DOMAIN NOTICE
- * National Center for Biotechnology Information
- *
- * This software/database is a "United States Government Work" under the
- * terms of the United States Copyright Act. It was written as part of
- * the author's official duties as a United States Government employee and
- * thus cannot be copyrighted. This software/database is freely available
- * to the public for use. The National Library of Medicine and the U.S.
- * Government have not placed any restriction on its use or reproduction.
- *
- * Although all reasonable efforts have been taken to ensure the accuracy
- * and reliability of the software and data, the NLM and the U.S.
- * Government do not and cannot warrant the performance or results that
- * may be obtained by using this software or data. The NLM and the U.S.
- * Government disclaim all warranties, express or implied, including
- * warranties of performance, merchantability or fitness for any particular
- * purpose.
- *
- * Please cite the author in any work or product based on this material.
- *
- * ===========================================================================
- *
- * Authors: Vladimir Tereshkov
- *
- * File Description:
- *
- */
- #include <corelib/ncbistd.hpp>
- #include <corelib/ncbiobj.hpp>
- #include <corelib/ncbi_tree.hpp>
- #include <serial/serialbase.hpp>
- #include <serial/stdtypes.hpp>
- BEGIN_NCBI_SCOPE
- class CPhyloTreeNode : public CTreeNode<CPhyloTreeNode*>
- {
- private:
- // primary node data
- string m_Label;
- double m_Distance;
- // visualization data
- int m_ID;
- pair <double, double> m_XY;
- pair <int, int> m_IDX;
- double m_Alpha;
- bool m_Selected;
- // useful for visualization params
- // = ( leaves of current node / leaves of parent node ) * annulus wedge of parent
- // for root let it be 360 - which will make sense for radial tree
- double m_AnnWedge;
- void x_CountLeafs(CPhyloTreeNode * node, Int4 & lfCount);
- public:
- CPhyloTreeNode();
- CPhyloTreeNode(int id, string label, double dist);
- virtual ~CPhyloTreeNode();
- const string & GetLabel(void) const;
- const double GetDistance(void) const;
- const double GetDistFromRoot(void) const;
-
- void SetLabel(string label);
- void SetDistance(double dist);
-
- pair <double, double> & XY(void) { return m_XY; }
- pair <int, int> & IDX(void) { return m_IDX; }
- bool GetSelected(void) { return m_Selected; }
- void SetSelected(bool bSel) { m_Selected = bSel; }
- double GetAnnWedge(void) { return m_AnnWedge; }
- void SetAnnWedge(double wedge) { m_AnnWedge = wedge; }
- double GetAngle(void) { return m_Alpha; }
- void SetAngle(double angle) { m_Alpha = angle; }
- int GetID(void) { return m_ID; }
- void SetID(int id) { m_ID = id; }
- // function counts amount of end-leafs in childs
- Int4 CountLeafs(void);
- };
- END_NCBI_SCOPE
- /*
- * ===========================================================================
- * $Log: phylo_tree_node.hpp,v $
- * Revision 1000.1 2004/06/01 19:52:57 gouriano
- * PRODUCTION: UPGRADED [GCC34_MSVC7] Dev-tree R1.4
- *
- * Revision 1.4 2004/04/28 19:27:27 tereshko
- * Added support for distances rendering
- *
- * Revision 1.3 2004/03/30 17:11:08 tereshko
- * Added support for events broadcasting
- *
- * Revision 1.2 2004/03/02 18:28:50 tereshko
- * Added support for calculating annual vertex weight
- *
- * Revision 1.1 2004/02/13 16:59:59 tereshko
- * Phylogenetic Tree Widget initial revision
- *
- * ===========================================================================
- */
- #endif // !defined(AFX_PHYLO_TREE_NODE_HPP__2F61D68C_0454_4BD0_89F2_037863D53E27__INCLUDED_)
-