seqgraphic_ds.hpp
上传用户:yhdzpy8989
上传日期:2007-06-13
资源大小:13604k
文件大小:3k
- /*
- * ===========================================================================
- * PRODUCTION $Log: seqgraphic_ds.hpp,v $
- * PRODUCTION Revision 1000.0 2004/04/12 18:26:25 gouriano
- * PRODUCTION PRODUCTION: IMPORTED [CATCHUP_003] Dev-tree R1.2
- * PRODUCTION
- * ===========================================================================
- */
- #ifndef GUI_WIDGETS_SEQ_GRAPHIC___SEQGRAPHIC_DS__HPP
- #define GUI_WIDGETS_SEQ_GRAPHIC___SEQGRAPHIC_DS__HPP
- /* $Id: seqgraphic_ds.hpp,v 1000.0 2004/04/12 18:26:25 gouriano Exp $
- * ===========================================================================
- *
- * PUBLIC DOMAIN NOTICE
- * National Center for Biotechnology Information
- *
- * This software/database is a "United States Government Work" under the
- * terms of the United States Copyright Act. It was written as part of
- * the author's official duties as a United States Government employee and
- * thus cannot be copyrighted. This software/database is freely available
- * to the public for use. The National Library of Medicine and the U.S.
- * Government have not placed any restriction on its use or reproduction.
- *
- * Although all reasonable efforts have been taken to ensure the accuracy
- * and reliability of the software and data, the NLM and the U.S.
- * Government do not and cannot warrant the performance or results that
- * may be obtained by using this software or data. The NLM and the U.S.
- * Government disclaim all warranties, express or implied, including
- * warranties of performance, merchantability or fitness for any particular
- * purpose.
- *
- * Please cite the author in any work or product based on this material.
- *
- * ===========================================================================
- *
- * Authors: Vlad Lebedev
- *
- * File Description:
- * Data source for Graphic Sequence Widget
- * (see <gui/widgets/seq_graphic/seqgraphic_widget.hpp>)
- *
- */
- #include <objmgr/scope.hpp>
- #include <objmgr/bioseq_handle.hpp>
- #include <objmgr/seq_vector.hpp>
- BEGIN_NCBI_SCOPE
- class NCBI_GUIWIDGETS_SEQGRAPHIC_EXPORT CSeqGraphicDataSource : public CObject
- {
- public:
- CSeqGraphicDataSource(objects::CScope& scope,
- const objects::CSeq_id& id);
- virtual ~CSeqGraphicDataSource() { };
-
- virtual objects::CBioseq_Handle GetBioseqHandle(void) const;
- virtual TSeqPos GetSequenceLength() const;
- virtual void GetSequence(TSeqPos from, TSeqPos to,
- string& buffer) const;
- private:
- objects::CBioseq_Handle m_Handle;
- CRef<objects::CSeqVector> m_SeqVector;
- };
- END_NCBI_SCOPE
- /*
- * ===========================================================================
- * $Log: seqgraphic_ds.hpp,v $
- * Revision 1000.0 2004/04/12 18:26:25 gouriano
- * PRODUCTION: IMPORTED [CATCHUP_003] Dev-tree R1.2
- *
- * Revision 1.2 2003/12/22 19:17:04 dicuccio
- * Code reformatting
- *
- * Revision 1.1 2003/12/22 12:52:42 lebedev
- * New files added
- *
- * ===========================================================================
- */
- #endif /* GUI_WIDGETS_SEQ_GRAPHIC___SEQGRAPHIC_DS__HPP */