split_blob.hpp
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- /*
- * ===========================================================================
- * PRODUCTION $Log: split_blob.hpp,v $
- * PRODUCTION Revision 1000.0 2004/04/12 17:34:08 gouriano
- * PRODUCTION PRODUCTION: IMPORTED [CATCHUP_003] Dev-tree R1.5
- * PRODUCTION
- * ===========================================================================
- */
- #ifndef NCBI_OBJMGR_SPLIT_SPLITTED_BLOB__HPP
- #define NCBI_OBJMGR_SPLIT_SPLITTED_BLOB__HPP
- /* $Id: split_blob.hpp,v 1000.0 2004/04/12 17:34:08 gouriano Exp $
- * ===========================================================================
- *
- * PUBLIC DOMAIN NOTICE
- * National Center for Biotechnology Information
- *
- * This software/database is a "United States Government Work" under the
- * terms of the United States Copyright Act. It was written as part of
- * the author's official duties as a United States Government employee and
- * thus cannot be copyrighted. This software/database is freely available
- * to the public for use. The National Library of Medicine and the U.S.
- * Government have not placed any restriction on its use or reproduction.
- *
- * Although all reasonable efforts have been taken to ensure the accuracy
- * and reliability of the software and data, the NLM and the U.S.
- * Government do not and cannot warrant the performance or results that
- * may be obtained by using this software or data. The NLM and the U.S.
- * Government disclaim all warranties, express or implied, including
- * warranties of performance, merchantability or fitness for any particular
- * purpose.
- *
- * Please cite the author in any work or product based on this material.
- *
- * ===========================================================================
- *
- * Author: Eugene Vasilchenko
- *
- * File Description:
- * Application for splitting blobs withing ID1 cache
- *
- * ===========================================================================
- */
- #include <corelib/ncbistd.hpp>
- #include <corelib/ncbiobj.hpp>
- #include <objects/seqsplit/ID2S_Chunk_Id.hpp>
- #include <vector>
- #include <map>
- BEGIN_NCBI_SCOPE
- BEGIN_SCOPE(objects)
- class CSeq_entry;
- class CID2S_Split_Info;
- class CID2S_Chunk;
- class CID2S_Chunk_Id;
- class CSplitBlob
- {
- public:
- CSplitBlob(void);
- ~CSplitBlob(void);
- CSplitBlob(const CSplitBlob& blob);
- CSplitBlob& operator=(const CSplitBlob& blob);
- void Reset(void);
- void Reset(const CSeq_entry& entry);
- void Reset(const CSeq_entry& skeleton,
- const CID2S_Split_Info& split_info);
- void AddChunk(const CID2S_Chunk_Id& id, const CID2S_Chunk& chunk);
- bool IsSplit(void) const
- {
- return m_SplitInfo;
- }
- typedef map<CID2S_Chunk_Id, CConstRef<CID2S_Chunk> > TChunks;
- const CSeq_entry& GetMainBlob(void) const
- {
- return *m_MainBlob;
- }
- const CID2S_Split_Info& GetSplitInfo(void) const
- {
- return *m_SplitInfo;
- }
- const TChunks& GetChunks(void) const
- {
- return m_Chunks;
- }
- private:
- CConstRef<CSeq_entry> m_MainBlob;
- CConstRef<CID2S_Split_Info> m_SplitInfo;
- TChunks m_Chunks;
- };
- END_SCOPE(objects)
- END_NCBI_SCOPE
- /*
- * ---------------------------------------------------------------------------
- * $Log: split_blob.hpp,v $
- * Revision 1000.0 2004/04/12 17:34:08 gouriano
- * PRODUCTION: IMPORTED [CATCHUP_003] Dev-tree R1.5
- *
- * Revision 1.5 2004/01/22 20:10:39 vasilche
- * 1. Splitted ID2 specs to two parts.
- * ID2 now specifies only protocol.
- * Specification of ID2 split data is moved to seqsplit ASN module.
- * For now they are still reside in one resulting library as before - libid2.
- * As the result split specific headers are now in objects/seqsplit.
- * 2. Moved ID2 and ID1 specific code out of object manager.
- * Protocol is processed by corresponding readers.
- * ID2 split parsing is processed by ncbi_xreader library - used by all readers.
- * 3. Updated OBJMGR_LIBS correspondingly.
- *
- * Revision 1.4 2003/12/03 19:30:46 kuznets
- * Misprint fixed
- *
- * Revision 1.3 2003/12/02 19:12:24 vasilche
- * Fixed compilation on MSVC.
- *
- * Revision 1.2 2003/11/26 23:05:00 vasilche
- * Removed extra semicolons after BEGIN_SCOPE and END_SCOPE.
- *
- * Revision 1.1 2003/11/12 16:18:33 vasilche
- * First implementation of ID2 blob splitter withing cache.
- *
- * ===========================================================================
- */
- #endif//NCBI_OBJMGR_SPLIT_SPLITTED_BLOB__HPP